Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J2Q9GZM3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
POLR2J2Q9GZM3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J2Q9GZM3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.02□□□□□ -0.16
POLR2J2Q9GZM3 AC136759.1-202ENST00000530858 2194 ntBASIC14.02□□□□□ -0.16
POLR2J2Q9GZM3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
POLR2J2Q9GZM3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
POLR2J2Q9GZM3 BEND3P1-201ENST00000421591 1944 ntBASIC14.02□□□□□ -0.16
POLR2J2Q9GZM3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 HSPA7-201ENST00000445535 1927 ntBASIC14.02□□□□□ -0.17
POLR2J2Q9GZM3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 DNAJB3-202ENST00000449667 1266 ntBASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 MEIS3P1-201ENST00000495167 958 ntBASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 AC044860.1-202ENST00000559481 777 ntBASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 AC004449.1-201ENST00000564240 433 ntBASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 AL596442.2-201ENST00000610240 980 ntBASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J2Q9GZM3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms