Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.65□□□□□ -0.39
SSBP3Q9BWW4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.39
SSBP3Q9BWW4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 AL138709.1-201ENST00000614840 1693 ntBASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 AC104457.1-201ENST00000401024 814 ntBASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 HLA-V-201ENST00000429037 534 ntBASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 YBX1P6-201ENST00000442962 1002 ntBASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 AC022616.1-201ENST00000518688 554 ntBASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 RN7SL48P-201ENST00000579283 293 ntBASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 AL603764.1-201ENST00000636452 321 ntBASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 TMBIM7P-203ENST00000641617 1718 ntBASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP3Q9BWW4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 TPM3P8-201ENST00000330554 643 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 AC099336.1-201ENST00000417053 1171 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 CNN2P8-201ENST00000421872 913 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 FAM197Y7-201ENST00000432892 766 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 CSF2RBP1-201ENST00000447905 391 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 BNIP3P42-201ENST00000454982 569 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 RNA5SP486-201ENST00000515961 83 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms