Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 HMGA1P7-201ENST00000406908 502 ntBASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC004461.1-201ENST00000412461 403 ntBASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AL355306.1-201ENST00000415580 579 ntBASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC005237.2-201ENST00000434368 219 ntBASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC023141.5-201ENST00000458585 616 ntBASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 RFPL4AP1-201ENST00000530883 850 ntBASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC022145.2-201ENST00000598203 171 ntBASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC005622.1-201ENST00000636801 1703 ntBASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NDUFAF3Q9BU61 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 AC152010.1-201ENST00000415779 2006 ntBASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 CYMP-203ENST00000474680 1263 ntBASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 KRT18P34-201ENST00000488218 1270 ntBASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 RARRES2P8-201ENST00000566335 367 ntBASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 AC027612.4-201ENST00000605371 583 ntBASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 AC106028.4-201ENST00000614509 607 ntBASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 AKAP8P1-201ENST00000434743 1349 ntBASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms