Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 AC254562.1-201ENST00000417586 456 ntBASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 AC125807.1-201ENST00000483097 614 ntBASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 AC004461.2-201ENST00000629517 803 ntBASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 AL137783.1-201ENST00000623494 1896 ntBASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HDHD3Q9BSH5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
HDHD3Q9BSH5 AC092135.3-201ENST00000624151 1846 ntBASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 AL139400.1-201ENST00000366220 510 ntBASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 AC004066.1-201ENST00000502488 802 ntBASIC12.77□□□□□ -0.37
HDHD3Q9BSH5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms