Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 KRT8P22-201ENST00000562317 1415 ntBASIC14.73□□□□□ -0.05
EBF4Q9BQW3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 HTR5BP-201ENST00000430851 1154 ntBASIC14.72□□□□□ -0.05
EBF4Q9BQW3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 RBPMS2P1-201ENST00000437762 623 ntBASIC14.72□□□□□ -0.05
EBF4Q9BQW3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 KRT126P-201ENST00000549467 1181 ntBASIC14.72□□□□□ -0.05
EBF4Q9BQW3 AC026150.2-201ENST00000564693 1156 ntBASIC14.72□□□□□ -0.05
EBF4Q9BQW3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 AL033527.5-202ENST00000641632 1098 ntBASIC14.72□□□□□ -0.05
EBF4Q9BQW3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
EBF4Q9BQW3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EBF4Q9BQW3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms