Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 LINC02228-204ENST00000642115 2962 ntBASIC12.53□□□□□ -0.4
GAFA1Q96PS6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 PDIA3P1-201ENST00000471856 1510 ntBASIC12.52□□□□□ -0.4
GAFA1Q96PS6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.52□□□□□ -0.4
GAFA1Q96PS6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC079776.1-201ENST00000401540 1152 ntBASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC078819.1-201ENST00000547454 765 ntBASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC012085.1-201ENST00000548270 765 ntBASIC12.52□□□□□ -0.41
GAFA1Q96PS6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 RAB43P1-201ENST00000561790 589 ntBASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC138466.3-201ENST00000619983 221 ntBASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC138951.2-201ENST00000623455 1161 ntBASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 AC003102.2-201ENST00000589195 1469 ntBASIC12.52□□□□□ -0.41
GAFA1Q96PS6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GAFA1Q96PS6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 SALL4P5-201ENST00000419001 1760 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 BOLA2P3-201ENST00000404566 256 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 ARSEP1-201ENST00000420443 635 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 CNN2P8-201ENST00000421872 913 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 TLE1P1-201ENST00000422965 589 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms