Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 KRT8P4-201ENST00000509735 1454 ntBASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 AC006486.2-201ENST00000624246 2199 ntBASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0A1Q93050 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 BX284668.4-201ENST00000453917 508 ntBASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 AC126915.1-201ENST00000522847 1038 ntBASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 ZACNP1-201ENST00000612259 710 ntBASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 AL021578.1-201ENST00000613646 709 ntBASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 ZBED1P1-201ENST00000502364 1930 ntBASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATP6V0A1Q93050 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
ATP6V0A1Q93050 FKBP4P6-201ENST00000457486 1332 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms