Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
USP9XQ93008 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
USP9XQ93008 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USP9XQ93008 AGGF1P2-201ENST00000426656 2106 ntBASIC12.88□□□□□ -0.35
USP9XQ93008 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC12.88□□□□□ -0.35
USP9XQ93008 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
USP9XQ93008 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.88□□□□□ -0.35
USP9XQ93008 AC124068.2-201ENST00000569473 1109 ntBASIC12.88□□□□□ -0.35
USP9XQ93008 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.88□□□□□ -0.35
USP9XQ93008 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.88□□□□□ -0.35
USP9XQ93008 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC12.88□□□□□ -0.35
USP9XQ93008 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC12.88□□□□□ -0.35
USP9XQ93008 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
USP9XQ93008 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USP9XQ93008 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
USP9XQ93008 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USP9XQ93008 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
USP9XQ93008 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.88□□□□□ -0.35
USP9XQ93008 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
USP9XQ93008 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
USP9XQ93008 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.87□□□□□ -0.35
USP9XQ93008 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC12.87□□□□□ -0.35
USP9XQ93008 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.87□□□□□ -0.35
USP9XQ93008 HERC2P11-201ENST00000562845 725 ntBASIC12.87□□□□□ -0.35
USP9XQ93008 AC100756.2-201ENST00000569537 736 ntBASIC12.87□□□□□ -0.35
USP9XQ93008 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 AC006483.2-201ENST00000609813 515 ntBASIC12.87□□□□□ -0.35
USP9XQ93008 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
USP9XQ93008 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.87□□□□□ -0.35
USP9XQ93008 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 OLA1P2-201ENST00000395519 1264 ntBASIC12.87□□□□□ -0.35
USP9XQ93008 TLE1P1-201ENST00000422965 589 ntBASIC12.87□□□□□ -0.35
USP9XQ93008 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.87□□□□□ -0.35
USP9XQ93008 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.87□□□□□ -0.35
USP9XQ93008 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
USP9XQ93008 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 AC021321.1-201ENST00000607397 1113 ntBASIC12.87□□□□□ -0.35
USP9XQ93008 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.87□□□□□ -0.35
USP9XQ93008 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
USP9XQ93008 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.87□□□□□ -0.35
USP9XQ93008 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
USP9XQ93008 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
USP9XQ93008 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
USP9XQ93008 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 AC069224.1-201ENST00000566372 1715 ntBASIC12.86□□□□□ -0.35
USP9XQ93008 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.86□□□□□ -0.35
USP9XQ93008 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.86□□□□□ -0.35
USP9XQ93008 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.86□□□□□ -0.35
USP9XQ93008 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.86□□□□□ -0.35
USP9XQ93008 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.86□□□□□ -0.35
USP9XQ93008 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
USP9XQ93008 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.86□□□□□ -0.35
USP9XQ93008 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 CICP13-201ENST00000422015 2789 ntBASIC12.86□□□□□ -0.35
USP9XQ93008 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.86□□□□□ -0.35
USP9XQ93008 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.86□□□□□ -0.35
USP9XQ93008 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.86□□□□□ -0.35
USP9XQ93008 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
USP9XQ93008 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USP9XQ93008 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.86□□□□□ -0.35
USP9XQ93008 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms