Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 IGHV3-42-201ENST00000520410 361 ntBASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AL512361.1-201ENST00000554200 418 ntBASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC010336.2-201ENST00000564226 506 ntBASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC025048.3-201ENST00000590609 569 ntBASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC005702.4-201ENST00000618393 416 ntBASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC087499.5-201ENST00000452760 1342 ntBASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC100757.3-201ENST00000622361 1406 ntBASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RTN4IP1Q8WWV3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 AC092183.1-201ENST00000469884 875 ntBASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 DUX4L27-201ENST00000554796 1261 ntBASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms