Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 RPSAP43-201ENST00000402237 625 ntBASIC13.14□□□□□ -0.31
CCDC107Q8WV48 AC211486.1-202ENST00000416371 468 ntBASIC13.14□□□□□ -0.31
CCDC107Q8WV48 UPF3AP3-201ENST00000420996 769 ntBASIC13.14□□□□□ -0.31
CCDC107Q8WV48 GPS2P2-201ENST00000430745 888 ntBASIC13.14□□□□□ -0.31
CCDC107Q8WV48 SPDYE14P-201ENST00000442619 822 ntBASIC13.14□□□□□ -0.31
CCDC107Q8WV48 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 AC211476.1-201ENST00000503899 468 ntBASIC13.14□□□□□ -0.31
CCDC107Q8WV48 AP000344.2-201ENST00000512987 629 ntBASIC13.14□□□□□ -0.31
CCDC107Q8WV48 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 RN7SL828P-201ENST00000607615 303 ntBASIC13.14□□□□□ -0.31
CCDC107Q8WV48 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCDC107Q8WV48 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.13□□□□□ -0.31
CCDC107Q8WV48 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms