Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 AL583810.1-201ENST00000553344 1045 ntBASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHROOM3Q8TF72 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 AC140479.7-201ENST00000636301 2332 ntBASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 RPL7P3-201ENST00000441388 714 ntBASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 ZNF767P-206ENST00000513792 565 ntBASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 SLC25A47P1-201ENST00000531577 414 ntBASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 NFIC-211ENST00000641145 8399 ntBASIC15.32■□□□□ 0.04
SHROOM3Q8TF72 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 RHOXF1P1-202ENST00000635473 501 ntBASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 FAM21FP-201ENST00000426241 1131 ntBASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 AC139749.1-202ENST00000617529 3139 ntBASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHROOM3Q8TF72 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 SALL4P5-201ENST00000419001 1760 ntBASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 KHSRPP1-201ENST00000427983 1768 ntBASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 AL136379.1-201ENST00000623471 2642 ntBASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 INTS4P1-203ENST00000641008 3683 ntBASIC15.3■□□□□ 0.04
SHROOM3Q8TF72 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms