Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 HTR5BP-201ENST00000430851 1154 ntBASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 AC092865.5-201ENST00000545435 363 ntBASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 AC010327.4-202ENST00000591484 748 ntBASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.98□□□□□ -0.01
RFWD2Q8NHY2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 KRT18P64-201ENST00000434946 1219 ntBASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 DNAJB3-201ENST00000446806 729 ntBASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 CEND1P1-201ENST00000451006 455 ntBASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 BANF1P1-201ENST00000553684 263 ntBASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD2Q8NHY2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms