Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 MSTO2P-201ENST00000314835 1709 ntBASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 HLA-K-203ENST00000430151 1046 ntBASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 AP005018.1-201ENST00000525475 301 ntBASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 AP001582.1-201ENST00000525856 295 ntBASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 MIR600HG-201ENST00000449175 5984 ntBASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SIMC1Q8NDZ2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 AL360270.3-201ENST00000609118 1348 ntBASIC14.27□□□□□ -0.12
SIMC1Q8NDZ2 LINC00552-201ENST00000625151 2579 ntBASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 HLA-V-201ENST00000429037 534 ntBASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 AC004066.1-201ENST00000502488 802 ntBASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 CLUHP6-201ENST00000580789 941 ntBASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 AC093813.1-201ENST00000605066 256 ntBASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms