Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 INTS4P2-202ENST00000614726 2019 ntBASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 AL442647.2-201ENST00000429864 857 ntBASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
LSMEM1Q8N8F7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 AL391825.1-201ENST00000457671 1364 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 AL137783.1-201ENST00000623494 1896 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 MTHFR-210ENST00000641407 2387 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 AC134915.1-201ENST00000426461 574 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 GNAQP1-201ENST00000444815 1067 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 SPTLC1P1-201ENST00000447199 261 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 INGX-202ENST00000489074 768 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 AC104596.2-201ENST00000512793 793 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 AC120045.2-201ENST00000567334 178 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 AC093726.1-201ENST00000608064 963 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 AC007431.3-201ENST00000623221 587 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 BX539320.1-201ENST00000623759 877 ntBASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms