Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 RNA5SP412-201ENST00000516234 123 ntBASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 AP000812.2-201ENST00000538934 718 ntBASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 AL606495.2-201ENST00000605867 535 ntBASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 TUBB1P2-201ENST00000422712 1306 ntBASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 TUBB1P1-201ENST00000503144 1300 ntBASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC33Q8N5R6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 AC015656.1-201ENST00000624209 3578 ntBASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 AC139749.1-202ENST00000617529 3139 ntBASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 MIR6787-201ENST00000616675 61 ntBASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 PCDHA3-202ENST00000532566 4594 ntBASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC33Q8N5R6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 RPL5P21-201ENST00000404620 815 ntBASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 AC026954.1-201ENST00000429771 1293 ntBASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 AP001582.1-201ENST00000525856 295 ntBASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CCDC33Q8N5R6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms