Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 COX5BP8-201ENST00000416911 349 ntBASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 COX20P2-201ENST00000452636 358 ntBASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 CICP14-201ENST00000629111 2732 ntBASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATPAF2Q8N5M1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 KRT17P7-201ENST00000451704 1104 ntBASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AC132938.2-201ENST00000579188 680 ntBASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 LINC02084-201ENST00000606069 1096 ntBASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AL591163.1-201ENST00000641757 987 ntBASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATPAF2Q8N5M1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms