Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 FO393414.2-201ENST00000405153 598 ntBASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 YBX1P6-201ENST00000442962 1002 ntBASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 BCRP2-202ENST00000447763 634 ntBASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 BCRP6-201ENST00000510112 632 ntBASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 BCRP7-201ENST00000511549 544 ntBASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 AP000812.2-201ENST00000538934 718 ntBASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC105Q8IYK2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 MROH4P-201ENST00000431302 1578 ntBASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 AL442647.2-201ENST00000429864 857 ntBASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 C2orf69P2-201ENST00000562032 1123 ntBASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 AC036164.1-201ENST00000570544 333 ntBASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 AC010328.2-201ENST00000597698 1111 ntBASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 AC133539.2-201ENST00000604757 467 ntBASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 LINC00552-201ENST00000625151 2579 ntBASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC105Q8IYK2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
CCDC105Q8IYK2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC105Q8IYK2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC105Q8IYK2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CCDC105Q8IYK2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms