Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNGA4Q8IV77 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.42■□□□□ 0.22
CNGA4Q8IV77 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 AC016397.2-201ENST00000624848 1985 ntBASIC16.42■□□□□ 0.22
CNGA4Q8IV77 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNGA4Q8IV77 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 HLA-K-203ENST00000430151 1046 ntBASIC16.41■□□□□ 0.22
CNGA4Q8IV77 GAPDHP40-201ENST00000505218 1006 ntBASIC16.41■□□□□ 0.22
CNGA4Q8IV77 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 AC093525.8-201ENST00000624099 1342 ntBASIC16.41■□□□□ 0.22
CNGA4Q8IV77 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNGA4Q8IV77 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms