Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC006483.2-201ENST00000609813 515 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC138035.3-201ENST00000622706 2791 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC018529.2-202ENST00000611482 3087 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 STK16-203ENST00000409516 895 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 HLA-DQB1-202ENST00000399079 1501 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AL162727.3-201ENST00000635661 2787 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 MROH4P-201ENST00000431302 1578 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 KHSRPP1-201ENST00000427983 1768 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 MIR566-201ENST00000385187 94 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC244197.1-201ENST00000456494 951 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC100827.2-201ENST00000563214 1194 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC018695.6-201ENST00000614011 534 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 SNX15-201ENST00000352068 771 ntTSL 5 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 KRT17P4-201ENST00000429445 819 ntBASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 ORAOV1P1-201ENST00000503108 395 ntBASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 TREHP1-201ENST00000531328 465 ntBASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 CR392039.1-201ENST00000623217 204 ntBASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.02□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms