Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 AP002353.1-201ENST00000528257 1599 ntBASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 NEU3-207ENST00000534628 746 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC141Q6ZP82 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 HLA-DQB1-202ENST00000399079 1501 ntBASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 LCK-206ENST00000373564 2137 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 AC107464.3-201ENST00000609172 737 ntBASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 AC090502.4-201ENST00000551714 1386 ntBASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC141Q6ZP82 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 KRT8P1-201ENST00000557533 1207 ntBASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 MT3-203ENST00000565838 421 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 AL161773.1-201ENST00000624845 863 ntBASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC141Q6ZP82 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 SF1-209ENST00000433274 2317 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 MIR645-201ENST00000385283 94 ntBASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 LYPLA2P1-203ENST00000447689 696 ntBASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 AP001184.1-201ENST00000637936 376 ntBASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC141Q6ZP82 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms