Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 RN7SL258P-201ENST00000478664 300 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC130709.1-201ENST00000484779 1212 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AP004833.1-201ENST00000507987 1238 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 MTND5P13-201ENST00000513046 1079 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC106820.3-201ENST00000561653 397 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC011773.4-201ENST00000562577 487 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC026803.1-201ENST00000569130 274 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC097359.3-201ENST00000603982 1210 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC004775.1-201ENST00000607389 753 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC073592.2-201ENST00000623062 780 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 AC099654.10-201ENST00000640395 161 ntBASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL2Q6WN34 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AL138688.1-201ENST00000624851 1594 ntBASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 MTND3P20-201ENST00000407663 186 ntBASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 RRM2P4-201ENST00000441721 562 ntBASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 LYPLA2P1-203ENST00000447689 696 ntBASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 LRRC34P1-201ENST00000542742 915 ntBASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 MTCYBP33-201ENST00000575007 1130 ntBASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AC073857.1-201ENST00000625082 1054 ntBASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 AC018470.1-201ENST00000624790 3129 ntBASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.61■□□□□ 0.25
CHRDL2Q6WN34 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL2Q6WN34 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL2Q6WN34 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRDL2Q6WN34 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms