Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.89■□□□□ 0.45
CTR9Q6PD62 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 AC126177.1-201ENST00000547829 2218 ntBASIC17.89■□□□□ 0.45
CTR9Q6PD62 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTR9Q6PD62 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CTR9Q6PD62 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 ACE3P-201ENST00000423435 1973 ntBASIC17.88■□□□□ 0.45
CTR9Q6PD62 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 MIR326-201ENST00000362220 95 ntBASIC17.88■□□□□ 0.45
CTR9Q6PD62 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 AC108725.1-201ENST00000495472 409 ntBASIC17.88■□□□□ 0.45
CTR9Q6PD62 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 AP000593.2-201ENST00000542775 1433 ntBASIC17.88■□□□□ 0.45
CTR9Q6PD62 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTR9Q6PD62 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTR9Q6PD62 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 AL023775.1-201ENST00000454907 1746 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 RN7SKP230-201ENST00000365642 335 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 BRWD1P1-201ENST00000401091 371 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 CHMP1AP1-201ENST00000445563 662 ntBASIC17.87■□□□□ 0.45
CTR9Q6PD62 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTR9Q6PD62 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.87■□□□□ 0.45
CTR9Q6PD62 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms