Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 AL354877.1-201ENST00000424412 413 ntBASIC18.06■□□□□ 0.48
RFX7Q2KHR2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 TPT1P11-201ENST00000458482 498 ntBASIC18.06■□□□□ 0.48
RFX7Q2KHR2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 MTHFR-210ENST00000641407 2387 ntBASIC18.06■□□□□ 0.48
RFX7Q2KHR2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX7Q2KHR2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 IGHJ2P-201ENST00000454480 60 ntBASIC18.05■□□□□ 0.48
RFX7Q2KHR2 MIR4783-201ENST00000580343 82 ntBASIC18.05■□□□□ 0.48
RFX7Q2KHR2 AC244157.2-201ENST00000616239 1006 ntBASIC18.05■□□□□ 0.48
RFX7Q2KHR2 AP001002.3-201ENST00000623482 206 ntBASIC18.05■□□□□ 0.48
RFX7Q2KHR2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 AC068587.10-201ENST00000641210 219 ntBASIC18.05■□□□□ 0.48
RFX7Q2KHR2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 AC232323.1-201ENST00000540724 2099 ntBASIC18.05■□□□□ 0.48
RFX7Q2KHR2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX7Q2KHR2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX7Q2KHR2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX7Q2KHR2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX7Q2KHR2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX7Q2KHR2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
RFX7Q2KHR2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.04■□□□□ 0.48
RFX7Q2KHR2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.04■□□□□ 0.48
RFX7Q2KHR2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.04■□□□□ 0.48
RFX7Q2KHR2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.04■□□□□ 0.48
RFX7Q2KHR2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms