Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CGNL1Q0VF96 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CGNL1Q0VF96 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CGNL1Q0VF96 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CGNL1Q0VF96 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CGNL1Q0VF96 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CGNL1Q0VF96 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CGNL1Q0VF96 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CGNL1Q0VF96 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CGNL1Q0VF96 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.33■□□□□ 0.85
CGNL1Q0VF96 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.33■□□□□ 0.85
CGNL1Q0VF96 IGHJ2P-201ENST00000454480 60 ntBASIC20.33■□□□□ 0.85
CGNL1Q0VF96 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 AC020914.3-201ENST00000594712 304 ntBASIC20.33■□□□□ 0.85
CGNL1Q0VF96 AC007663.3-201ENST00000609632 465 ntBASIC20.33■□□□□ 0.85
CGNL1Q0VF96 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC20.33■□□□□ 0.85
CGNL1Q0VF96 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.33■□□□□ 0.84
CGNL1Q0VF96 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 AC126915.1-201ENST00000522847 1038 ntBASIC20.32■□□□□ 0.84
CGNL1Q0VF96 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 DBET-201ENST00000630918 3363 ntBASIC20.32■□□□□ 0.84
CGNL1Q0VF96 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGNL1Q0VF96 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 AC008825.2-201ENST00000603374 718 ntBASIC20.31■□□□□ 0.84
CGNL1Q0VF96 BX088702.1-201ENST00000610784 235 ntBASIC20.31■□□□□ 0.84
CGNL1Q0VF96 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CGNL1Q0VF96 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms