Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
YBX1P67809 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 AL137783.1-201ENST00000623494 1896 ntBASIC14.71□□□□□ -0.05
YBX1P67809 AC079781.5-202ENST00000641784 3743 ntBASIC14.71□□□□□ -0.05
YBX1P67809 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
YBX1P67809 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
YBX1P67809 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
YBX1P67809 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
YBX1P67809 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
YBX1P67809 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
YBX1P67809 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.71□□□□□ -0.06
YBX1P67809 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
YBX1P67809 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
YBX1P67809 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 AC134312.5-201ENST00000568031 1313 ntBASIC14.7□□□□□ -0.06
YBX1P67809 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
YBX1P67809 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
YBX1P67809 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
YBX1P67809 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 BAATP1-201ENST00000412284 1225 ntBASIC14.7□□□□□ -0.06
YBX1P67809 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.7□□□□□ -0.06
YBX1P67809 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 BCRP2-202ENST00000447763 634 ntBASIC14.7□□□□□ -0.06
YBX1P67809 KRT17P7-201ENST00000451704 1104 ntBASIC14.7□□□□□ -0.06
YBX1P67809 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.7□□□□□ -0.06
YBX1P67809 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.7□□□□□ -0.06
YBX1P67809 BCRP6-201ENST00000510112 632 ntBASIC14.7□□□□□ -0.06
YBX1P67809 BCRP7-201ENST00000511549 544 ntBASIC14.7□□□□□ -0.06
YBX1P67809 AP001889.1-201ENST00000525414 633 ntBASIC14.7□□□□□ -0.06
YBX1P67809 AC068587.3-201ENST00000526613 355 ntBASIC14.7□□□□□ -0.06
YBX1P67809 SLC25A47P1-201ENST00000531577 414 ntBASIC14.7□□□□□ -0.06
YBX1P67809 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 CR383656.12-201ENST00000549567 513 ntBASIC14.7□□□□□ -0.06
YBX1P67809 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.7□□□□□ -0.06
YBX1P67809 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 AC113367.3-201ENST00000508316 1912 ntBASIC14.7□□□□□ -0.06
YBX1P67809 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.7□□□□□ -0.06
YBX1P67809 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
YBX1P67809 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
YBX1P67809 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
YBX1P67809 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.69□□□□□ -0.06
YBX1P67809 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 HSPA7-201ENST00000445535 1927 ntBASIC14.69□□□□□ -0.06
YBX1P67809 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.69□□□□□ -0.06
YBX1P67809 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 AL139094.1-201ENST00000405549 1188 ntBASIC14.69□□□□□ -0.06
YBX1P67809 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 U91328.1-201ENST00000437528 223 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms