Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB1AP62820 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
RAB1AP62820 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
RAB1AP62820 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB1AP62820 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB1AP62820 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 AL157414.3-201ENST00000624276 1954 ntBASIC13.32□□□□□ -0.28
RAB1AP62820 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.32□□□□□ -0.28
RAB1AP62820 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.32□□□□□ -0.28
RAB1AP62820 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.32□□□□□ -0.28
RAB1AP62820 AL139094.1-201ENST00000405549 1188 ntBASIC13.32□□□□□ -0.28
RAB1AP62820 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB1AP62820 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
RAB1AP62820 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 ZBED1P1-201ENST00000502364 1930 ntBASIC13.32□□□□□ -0.28
RAB1AP62820 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB1AP62820 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 AC134312.5-201ENST00000568031 1313 ntBASIC13.32□□□□□ -0.28
RAB1AP62820 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB1AP62820 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 REXO1L2P-201ENST00000425429 2069 ntBASIC13.32□□□□□ -0.28
RAB1AP62820 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB1AP62820 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RAB1AP62820 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB1AP62820 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RAB1AP62820 RNU1-114P-201ENST00000365297 166 ntBASIC13.31□□□□□ -0.28
RAB1AP62820 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 BAATP1-201ENST00000412284 1225 ntBASIC13.31□□□□□ -0.28
RAB1AP62820 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.31□□□□□ -0.28
RAB1AP62820 KLF2P2-201ENST00000416807 1039 ntBASIC13.31□□□□□ -0.28
RAB1AP62820 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB1AP62820 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB1AP62820 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB1AP62820 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB1AP62820 TTTY23B-201ENST00000442790 549 ntBASIC13.31□□□□□ -0.28
RAB1AP62820 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB1AP62820 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB1AP62820 AC022137.2-201ENST00000503482 481 ntBASIC13.31□□□□□ -0.28
RAB1AP62820 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms