Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AL118558.3-201ENST00000607414 1079 ntBASIC17.32■□□□□ 0.36
CHMP4BP1P59074 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 CICP23-201ENST00000605013 2741 ntBASIC17.32■□□□□ 0.36
CHMP4BP1P59074 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP4BP1P59074 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 MIR326-201ENST00000362220 95 ntBASIC17.31■□□□□ 0.36
CHMP4BP1P59074 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 AC078819.1-201ENST00000547454 765 ntBASIC17.31■□□□□ 0.36
CHMP4BP1P59074 AC012085.1-201ENST00000548270 765 ntBASIC17.31■□□□□ 0.36
CHMP4BP1P59074 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.31■□□□□ 0.36
CHMP4BP1P59074 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 AC015910.1-201ENST00000579400 975 ntBASIC17.31■□□□□ 0.36
CHMP4BP1P59074 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.31■□□□□ 0.36
CHMP4BP1P59074 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 AC011477.6-201ENST00000604980 1927 ntBASIC17.31■□□□□ 0.36
CHMP4BP1P59074 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP4BP1P59074 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 AL138799.1-201ENST00000448213 1675 ntBASIC17.3■□□□□ 0.36
CHMP4BP1P59074 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 ACKR1-201ENST00000368121 1240 ntBASIC17.3■□□□□ 0.36
CHMP4BP1P59074 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 AC023310.1-201ENST00000554836 735 ntBASIC17.3■□□□□ 0.36
CHMP4BP1P59074 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP4BP1P59074 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms