Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.27□□□□□ -0.13
WNT3P56703 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3P56703 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.27□□□□□ -0.13
WNT3P56703 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3P56703 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3P56703 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3P56703 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.27□□□□□ -0.13
WNT3P56703 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.27□□□□□ -0.13
WNT3P56703 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.27□□□□□ -0.13
WNT3P56703 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3P56703 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3P56703 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3P56703 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.26□□□□□ -0.13
WNT3P56703 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 SLC7A15P-201ENST00000424028 1363 ntBASIC14.26□□□□□ -0.13
WNT3P56703 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.26□□□□□ -0.13
WNT3P56703 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
WNT3P56703 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
WNT3P56703 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3P56703 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 AC098850.1-201ENST00000419919 790 ntBASIC14.26□□□□□ -0.13
WNT3P56703 KRT17P7-201ENST00000451704 1104 ntBASIC14.26□□□□□ -0.13
WNT3P56703 INE1-201ENST00000456273 945 ntBASIC14.26□□□□□ -0.13
WNT3P56703 AC093004.1-201ENST00000508850 424 ntBASIC14.26□□□□□ -0.13
WNT3P56703 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.26□□□□□ -0.13
WNT3P56703 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3P56703 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3P56703 AC120045.2-201ENST00000567334 178 ntBASIC14.26□□□□□ -0.13
WNT3P56703 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3P56703 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3P56703 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3P56703 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
WNT3P56703 BX539320.1-201ENST00000623759 877 ntBASIC14.26□□□□□ -0.13
WNT3P56703 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
WNT3P56703 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 AGGF1P1-201ENST00000509500 2073 ntBASIC14.26□□□□□ -0.13
WNT3P56703 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3P56703 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3P56703 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3P56703 AC005840.4-201ENST00000541242 2494 ntBASIC14.25□□□□□ -0.13
WNT3P56703 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3P56703 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3P56703 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3P56703 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
WNT3P56703 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3P56703 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.25□□□□□ -0.13
WNT3P56703 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
WNT3P56703 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
WNT3P56703 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3P56703 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3P56703 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
WNT3P56703 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
WNT3P56703 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.25□□□□□ -0.13
WNT3P56703 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3P56703 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
WNT3P56703 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3P56703 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
WNT3P56703 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.25□□□□□ -0.13
WNT3P56703 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.25□□□□□ -0.13
WNT3P56703 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3P56703 RPL13AP25-201ENST00000484130 612 ntBASIC14.25□□□□□ -0.13
WNT3P56703 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.25□□□□□ -0.13
WNT3P56703 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.25□□□□□ -0.13
WNT3P56703 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.25□□□□□ -0.13
WNT3P56703 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.25□□□□□ -0.13
WNT3P56703 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3P56703 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.25□□□□□ -0.13
WNT3P56703 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3P56703 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms