Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.47□□□□□ -0.25
GFRA1P56159 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.47□□□□□ -0.25
GFRA1P56159 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.47□□□□□ -0.25
GFRA1P56159 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.47□□□□□ -0.25
GFRA1P56159 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
GFRA1P56159 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.47□□□□□ -0.25
GFRA1P56159 AL358472.3-201ENST00000608147 415 ntBASIC13.47□□□□□ -0.25
GFRA1P56159 AC091271.1-201ENST00000611877 1162 ntBASIC13.47□□□□□ -0.25
GFRA1P56159 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
GFRA1P56159 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 SALL4P5-201ENST00000419001 1760 ntBASIC13.47□□□□□ -0.25
GFRA1P56159 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GFRA1P56159 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.47□□□□□ -0.25
GFRA1P56159 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.47□□□□□ -0.25
GFRA1P56159 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.47□□□□□ -0.25
GFRA1P56159 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 TCAF2P1-201ENST00000291129 2421 ntBASIC13.47□□□□□ -0.25
GFRA1P56159 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
GFRA1P56159 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.46□□□□□ -0.25
GFRA1P56159 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
GFRA1P56159 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
GFRA1P56159 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.46□□□□□ -0.25
GFRA1P56159 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.46□□□□□ -0.25
GFRA1P56159 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.46□□□□□ -0.25
GFRA1P56159 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 HSPB1P2-201ENST00000448722 546 ntBASIC13.46□□□□□ -0.25
GFRA1P56159 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.46□□□□□ -0.25
GFRA1P56159 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.46□□□□□ -0.25
GFRA1P56159 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.46□□□□□ -0.25
GFRA1P56159 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.46□□□□□ -0.25
GFRA1P56159 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.46□□□□□ -0.25
GFRA1P56159 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.46□□□□□ -0.25
GFRA1P56159 AL096828.3-201ENST00000615354 462 ntBASIC13.46□□□□□ -0.25
GFRA1P56159 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 AP001002.3-201ENST00000623482 206 ntBASIC13.46□□□□□ -0.25
GFRA1P56159 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.46□□□□□ -0.25
GFRA1P56159 AC002472.3-201ENST00000640124 621 ntBASIC13.46□□□□□ -0.25
GFRA1P56159 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.46□□□□□ -0.25
GFRA1P56159 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
GFRA1P56159 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GFRA1P56159 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GFRA1P56159 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GFRA1P56159 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GFRA1P56159 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GFRA1P56159 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GFRA1P56159 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.46□□□□□ -0.26
GFRA1P56159 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.46□□□□□ -0.26
GFRA1P56159 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GFRA1P56159 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GFRA1P56159 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.45□□□□□ -0.26
GFRA1P56159 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.45□□□□□ -0.26
GFRA1P56159 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.45□□□□□ -0.26
GFRA1P56159 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.45□□□□□ -0.26
GFRA1P56159 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
GFRA1P56159 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 MIR663B-201ENST00000408361 115 ntBASIC13.45□□□□□ -0.26
GFRA1P56159 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.45□□□□□ -0.26
GFRA1P56159 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GFRA1P56159 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.45□□□□□ -0.26
GFRA1P56159 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms