Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.35□□□□□ -0.11
CASP9P55211 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.35□□□□□ -0.11
CASP9P55211 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.35□□□□□ -0.11
CASP9P55211 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.35□□□□□ -0.11
CASP9P55211 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
CASP9P55211 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CASP9P55211 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 SAMD11P1-201ENST00000571429 661 ntBASIC14.35□□□□□ -0.11
CASP9P55211 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.35□□□□□ -0.11
CASP9P55211 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
CASP9P55211 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.35□□□□□ -0.11
CASP9P55211 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.35□□□□□ -0.11
CASP9P55211 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.35□□□□□ -0.11
CASP9P55211 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CASP9P55211 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.35□□□□□ -0.11
CASP9P55211 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.35□□□□□ -0.11
CASP9P55211 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CASP9P55211 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASP9P55211 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 LILRP1-201ENST00000444199 1370 ntBASIC14.34□□□□□ -0.11
CASP9P55211 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.34□□□□□ -0.11
CASP9P55211 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.34□□□□□ -0.11
CASP9P55211 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CASP9P55211 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.34□□□□□ -0.11
CASP9P55211 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.34□□□□□ -0.11
CASP9P55211 AC055876.3-201ENST00000431496 288 ntBASIC14.34□□□□□ -0.11
CASP9P55211 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.34□□□□□ -0.11
CASP9P55211 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.34□□□□□ -0.11
CASP9P55211 MEIS3P1-201ENST00000495167 958 ntBASIC14.34□□□□□ -0.11
CASP9P55211 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.34□□□□□ -0.11
CASP9P55211 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.34□□□□□ -0.11
CASP9P55211 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 AL390955.2-201ENST00000603032 514 ntBASIC14.34□□□□□ -0.11
CASP9P55211 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 AC138649.4-201ENST00000612222 287 ntBASIC14.34□□□□□ -0.11
CASP9P55211 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.34□□□□□ -0.11
CASP9P55211 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.34□□□□□ -0.11
CASP9P55211 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASP9P55211 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.33□□□□□ -0.11
CASP9P55211 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.33□□□□□ -0.11
CASP9P55211 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CASP9P55211 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CASP9P55211 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CASP9P55211 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CASP9P55211 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CASP9P55211 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CASP9P55211 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CASP9P55211 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.33□□□□□ -0.11
CASP9P55211 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CASP9P55211 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.33□□□□□ -0.12
CASP9P55211 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CASP9P55211 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CASP9P55211 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CASP9P55211 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CASP9P55211 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CASP9P55211 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CASP9P55211 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms