Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
ATXN3P54252 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
ATXN3P54252 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ATXN3P54252 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.53■□□□□ 0.08
ATXN3P54252 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.53■□□□□ 0.08
ATXN3P54252 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ATXN3P54252 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.53■□□□□ 0.08
ATXN3P54252 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
ATXN3P54252 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ATXN3P54252 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.52■□□□□ 0.08
ATXN3P54252 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.52■□□□□ 0.08
ATXN3P54252 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ATXN3P54252 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.52■□□□□ 0.08
ATXN3P54252 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ATXN3P54252 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ATXN3P54252 SLC25A24P2-201ENST00000415059 510 ntBASIC15.52■□□□□ 0.08
ATXN3P54252 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.52■□□□□ 0.08
ATXN3P54252 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.52■□□□□ 0.08
ATXN3P54252 AC006033.1-201ENST00000440505 426 ntBASIC15.52■□□□□ 0.08
ATXN3P54252 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.52■□□□□ 0.08
ATXN3P54252 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATXN3P54252 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.52■□□□□ 0.08
ATXN3P54252 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.52■□□□□ 0.08
ATXN3P54252 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.52■□□□□ 0.08
ATXN3P54252 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.52■□□□□ 0.08
ATXN3P54252 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.52■□□□□ 0.08
ATXN3P54252 AL359258.3-201ENST00000622910 2331 ntBASIC15.52■□□□□ 0.07
ATXN3P54252 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ATXN3P54252 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATXN3P54252 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.52■□□□□ 0.07
ATXN3P54252 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.52■□□□□ 0.07
ATXN3P54252 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ATXN3P54252 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.52■□□□□ 0.07
ATXN3P54252 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
ATXN3P54252 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ATXN3P54252 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 TOMM22P5-201ENST00000416399 439 ntBASIC15.51■□□□□ 0.07
ATXN3P54252 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.51■□□□□ 0.07
ATXN3P54252 AC026954.1-201ENST00000429771 1293 ntBASIC15.51■□□□□ 0.07
ATXN3P54252 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms