Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC093813.1-201ENST00000605066 256 ntBASIC13.75□□□□□ -0.21
HMGA2P52926 AC107373.2-201ENST00000607735 490 ntBASIC13.75□□□□□ -0.21
HMGA2P52926 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.75□□□□□ -0.21
HMGA2P52926 AL603764.1-201ENST00000636452 321 ntBASIC13.75□□□□□ -0.21
HMGA2P52926 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.75□□□□□ -0.21
HMGA2P52926 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
HMGA2P52926 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HMGA2P52926 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGA2P52926 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.74□□□□□ -0.21
HMGA2P52926 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HMGA2P52926 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.74□□□□□ -0.21
HMGA2P52926 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.74□□□□□ -0.21
HMGA2P52926 AL139094.1-201ENST00000405549 1188 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 TLE1P1-201ENST00000422965 589 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.74□□□□□ -0.21
HMGA2P52926 CNN2P2-201ENST00000443536 909 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 AP006288.1-201ENST00000446065 395 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 CNN2P3-201ENST00000450201 906 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.74□□□□□ -0.21
HMGA2P52926 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.74□□□□□ -0.21
HMGA2P52926 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 AC092865.5-201ENST00000545435 363 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.74□□□□□ -0.21
HMGA2P52926 AC140878.1-201ENST00000565277 250 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 AC010327.4-202ENST00000591484 748 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 AC027612.4-201ENST00000605371 583 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 AL662799.1-202ENST00000614205 422 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 AL136317.3-201ENST00000618497 906 ntBASIC13.74□□□□□ -0.21
HMGA2P52926 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.74□□□□□ -0.21
HMGA2P52926 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
HMGA2P52926 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HMGA2P52926 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGA2P52926 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HMGA2P52926 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
HMGA2P52926 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HMGA2P52926 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.73□□□□□ -0.21
HMGA2P52926 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.73□□□□□ -0.21
HMGA2P52926 AC092580.3-201ENST00000430932 139 ntBASIC13.73□□□□□ -0.21
HMGA2P52926 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms