Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 AC011700.1-201ENST00000610409 2627 ntBASIC12.19□□□□□ -0.46
RAB5CP51148 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RAB5CP51148 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 AC073508.3-201ENST00000619697 1419 ntBASIC12.19□□□□□ -0.46
RAB5CP51148 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RAB5CP51148 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5CP51148 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB5CP51148 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5CP51148 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RAB5CP51148 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 AC004241.5-201ENST00000623870 2448 ntBASIC12.18□□□□□ -0.46
RAB5CP51148 AL354702.1-201ENST00000442006 1960 ntBASIC12.18□□□□□ -0.46
RAB5CP51148 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RAB5CP51148 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RAB5CP51148 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RAB5CP51148 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB5CP51148 DUSP5P1-201ENST00000441325 1139 ntBASIC12.18□□□□□ -0.46
RAB5CP51148 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB5CP51148 LINC00265-3P-201ENST00000447588 903 ntBASIC12.18□□□□□ -0.46
RAB5CP51148 KRT16P4-201ENST00000453883 522 ntBASIC12.18□□□□□ -0.46
RAB5CP51148 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
RAB5CP51148 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB5CP51148 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
RAB5CP51148 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 AC069148.1-201ENST00000608741 768 ntBASIC12.18□□□□□ -0.46
RAB5CP51148 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 AL645728.2-202ENST00000641679 227 ntBASIC12.18□□□□□ -0.46
RAB5CP51148 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 AGGF1P1-201ENST00000509500 2073 ntBASIC12.18□□□□□ -0.46
RAB5CP51148 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB5CP51148 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RAB5CP51148 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB5CP51148 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RAB5CP51148 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RAB5CP51148 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB5CP51148 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB5CP51148 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB5CP51148 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
RAB5CP51148 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB5CP51148 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB5CP51148 REXO1L4P-201ENST00000605109 1937 ntBASIC12.17□□□□□ -0.46
RAB5CP51148 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB5CP51148 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB5CP51148 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB5CP51148 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
RAB5CP51148 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB5CP51148 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms