Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RNF144AP50876 MTHFR-210ENST00000641407 2387 ntBASIC14.11□□□□□ -0.15
RNF144AP50876 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RNF144AP50876 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 WASH3P-207ENST00000560956 1394 ntBASIC14.11□□□□□ -0.15
RNF144AP50876 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RNF144AP50876 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RNF144AP50876 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF144AP50876 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF144AP50876 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.11□□□□□ -0.15
RNF144AP50876 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.11□□□□□ -0.15
RNF144AP50876 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF144AP50876 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF144AP50876 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
RNF144AP50876 SAMD11P1-201ENST00000571429 661 ntBASIC14.11□□□□□ -0.15
RNF144AP50876 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RNF144AP50876 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF144AP50876 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RNF144AP50876 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RNF144AP50876 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
RNF144AP50876 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RNF144AP50876 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
RNF144AP50876 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
RNF144AP50876 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF144AP50876 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF144AP50876 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF144AP50876 MYCLP2-201ENST00000449268 967 ntBASIC14.1□□□□□ -0.15
RNF144AP50876 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 AC093004.1-201ENST00000508850 424 ntBASIC14.1□□□□□ -0.15
RNF144AP50876 AP001582.1-201ENST00000525856 295 ntBASIC14.1□□□□□ -0.15
RNF144AP50876 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF144AP50876 AC190387.1-201ENST00000551683 408 ntBASIC14.1□□□□□ -0.15
RNF144AP50876 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF144AP50876 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 AL359711.2-201ENST00000563105 872 ntBASIC14.1□□□□□ -0.15
RNF144AP50876 SPDYE22P-201ENST00000582158 798 ntBASIC14.1□□□□□ -0.15
RNF144AP50876 CTBP2P3-201ENST00000585629 1255 ntBASIC14.1□□□□□ -0.15
RNF144AP50876 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.1□□□□□ -0.15
RNF144AP50876 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF144AP50876 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RNF144AP50876 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF144AP50876 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF144AP50876 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF144AP50876 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RNF144AP50876 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms