Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDK7P50613 AC012441.2-201ENST00000444843 739 ntBASIC16.58■□□□□ 0.24
CDK7P50613 AC114501.1-201ENST00000445949 172 ntBASIC16.58■□□□□ 0.24
CDK7P50613 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.58■□□□□ 0.24
CDK7P50613 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK7P50613 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.58■□□□□ 0.24
CDK7P50613 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK7P50613 PGAM1P5-201ENST00000548011 764 ntBASIC16.58■□□□□ 0.24
CDK7P50613 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK7P50613 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.58■□□□□ 0.24
CDK7P50613 AC132192.2-201ENST00000596206 1147 ntBASIC16.58■□□□□ 0.24
CDK7P50613 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDK7P50613 AC092171.5-201ENST00000608012 942 ntBASIC16.58■□□□□ 0.24
CDK7P50613 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.58■□□□□ 0.24
CDK7P50613 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK7P50613 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.58■□□□□ 0.24
CDK7P50613 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.58■□□□□ 0.24
CDK7P50613 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CDK7P50613 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK7P50613 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.58■□□□□ 0.24
CDK7P50613 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDK7P50613 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDK7P50613 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK7P50613 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDK7P50613 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.58■□□□□ 0.24
CDK7P50613 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK7P50613 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CDK7P50613 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDK7P50613 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK7P50613 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CDK7P50613 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDK7P50613 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDK7P50613 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK7P50613 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK7P50613 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDK7P50613 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK7P50613 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.57■□□□□ 0.24
CDK7P50613 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.57■□□□□ 0.24
CDK7P50613 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 TBC1D3J-201ENST00000620719 1426 ntBASIC16.57■□□□□ 0.24
CDK7P50613 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.57■□□□□ 0.24
CDK7P50613 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDK7P50613 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.57■□□□□ 0.24
CDK7P50613 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK7P50613 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.57■□□□□ 0.24
CDK7P50613 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.57■□□□□ 0.24
CDK7P50613 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.57■□□□□ 0.24
CDK7P50613 HLA-C-210ENST00000640219 976 ntBASIC16.57■□□□□ 0.24
CDK7P50613 AL805961.1-201ENST00000642026 753 ntBASIC16.57■□□□□ 0.24
CDK7P50613 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 AC092384.3-202ENST00000564646 2873 ntBASIC16.57■□□□□ 0.24
CDK7P50613 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK7P50613 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK7P50613 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDK7P50613 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 AC020910.5-201ENST00000623668 1865 ntBASIC16.56■□□□□ 0.24
CDK7P50613 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK7P50613 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.56■□□□□ 0.24
CDK7P50613 AC244394.1-201ENST00000435000 1665 ntBASIC16.56■□□□□ 0.24
CDK7P50613 AC011840.2-201ENST00000563063 1520 ntBASIC16.56■□□□□ 0.24
CDK7P50613 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDK7P50613 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
CDK7P50613 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK7P50613 AL008718.2-201ENST00000609206 1313 ntBASIC16.56■□□□□ 0.24
CDK7P50613 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.56■□□□□ 0.24
CDK7P50613 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 RN7SKP230-201ENST00000365642 335 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms