Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 MIR663B-201ENST00000408361 115 ntBASIC13.42□□□□□ -0.26
LHX2P50458 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.42□□□□□ -0.26
LHX2P50458 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.42□□□□□ -0.26
LHX2P50458 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.42□□□□□ -0.26
LHX2P50458 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 AC100850.1-201ENST00000506768 649 ntBASIC13.42□□□□□ -0.26
LHX2P50458 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LHX2P50458 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.42□□□□□ -0.26
LHX2P50458 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.42□□□□□ -0.26
LHX2P50458 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.42□□□□□ -0.26
LHX2P50458 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LHX2P50458 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.42□□□□□ -0.26
LHX2P50458 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.42□□□□□ -0.26
LHX2P50458 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LHX2P50458 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LHX2P50458 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LHX2P50458 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LHX2P50458 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.41□□□□□ -0.26
LHX2P50458 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.41□□□□□ -0.26
LHX2P50458 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LHX2P50458 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.41□□□□□ -0.26
LHX2P50458 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.41□□□□□ -0.26
LHX2P50458 AC104982.3-201ENST00000581995 514 ntBASIC13.41□□□□□ -0.26
LHX2P50458 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.41□□□□□ -0.26
LHX2P50458 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.41□□□□□ -0.26
LHX2P50458 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 TCAF2P1-201ENST00000291129 2421 ntBASIC13.41□□□□□ -0.26
LHX2P50458 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.41□□□□□ -0.26
LHX2P50458 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LHX2P50458 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.41□□□□□ -0.26
LHX2P50458 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LHX2P50458 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LHX2P50458 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
LHX2P50458 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LHX2P50458 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.4□□□□□ -0.26
LHX2P50458 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms