Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPFP49454 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPFP49454 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPFP49454 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.55■□□□□ 0.24
CENPFP49454 AC011462.4-201ENST00000616866 449 ntBASIC16.55■□□□□ 0.24
CENPFP49454 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPFP49454 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 CTBP2P8-201ENST00000422584 1330 ntBASIC16.55■□□□□ 0.24
CENPFP49454 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPFP49454 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPFP49454 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPFP49454 XBP1P1-201ENST00000436573 652 ntBASIC16.55■□□□□ 0.24
CENPFP49454 CHCHD2P2-201ENST00000503744 321 ntBASIC16.55■□□□□ 0.24
CENPFP49454 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CENPFP49454 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.54■□□□□ 0.24
CENPFP49454 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CENPFP49454 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 MIR648-201ENST00000385046 94 ntBASIC16.54■□□□□ 0.24
CENPFP49454 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.54■□□□□ 0.24
CENPFP49454 BCL2L12P1-201ENST00000508390 733 ntBASIC16.54■□□□□ 0.24
CENPFP49454 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CENPFP49454 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CENPFP49454 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.54■□□□□ 0.24
CENPFP49454 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.54■□□□□ 0.24
CENPFP49454 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.54■□□□□ 0.24
CENPFP49454 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.54■□□□□ 0.24
CENPFP49454 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.54■□□□□ 0.24
CENPFP49454 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.54■□□□□ 0.24
CENPFP49454 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPFP49454 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.54■□□□□ 0.24
CENPFP49454 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.53■□□□□ 0.24
CENPFP49454 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.53■□□□□ 0.24
CENPFP49454 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.53■□□□□ 0.24
CENPFP49454 AC023141.7-201ENST00000430646 407 ntBASIC16.53■□□□□ 0.24
CENPFP49454 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.53■□□□□ 0.24
CENPFP49454 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 MED11-202ENST00000573708 802 ntTSL 2 BASIC16.53■□□□□ 0.24
CENPFP49454 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.53■□□□□ 0.24
CENPFP49454 MIR3188-201ENST00000583494 85 ntBASIC16.53■□□□□ 0.24
CENPFP49454 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.53■□□□□ 0.24
CENPFP49454 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.53■□□□□ 0.24
CENPFP49454 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.53■□□□□ 0.24
CENPFP49454 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.53■□□□□ 0.24
CENPFP49454 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CENPFP49454 AC133540.1-201ENST00000620845 1019 ntBASIC16.53■□□□□ 0.24
CENPFP49454 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.53■□□□□ 0.24
CENPFP49454 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CENPFP49454 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.53■□□□□ 0.24
CENPFP49454 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CENPFP49454 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.53■□□□□ 0.24
CENPFP49454 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPFP49454 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CENPFP49454 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.52■□□□□ 0.24
CENPFP49454 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CENPFP49454 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CENPFP49454 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.52■□□□□ 0.24
CENPFP49454 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CENPFP49454 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms