Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.69■□□□□ 0.42
NEDD4P46934 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.69■□□□□ 0.42
NEDD4P46934 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.69■□□□□ 0.42
NEDD4P46934 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NEDD4P46934 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NEDD4P46934 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.69■□□□□ 0.42
NEDD4P46934 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NEDD4P46934 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NEDD4P46934 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.69■□□□□ 0.42
NEDD4P46934 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
NEDD4P46934 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.69■□□□□ 0.42
NEDD4P46934 AC007191.1-201ENST00000623179 2995 ntBASIC17.69■□□□□ 0.42
NEDD4P46934 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.69■□□□□ 0.42
NEDD4P46934 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.69■□□□□ 0.42
NEDD4P46934 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.69■□□□□ 0.42
NEDD4P46934 RN7SL713P-201ENST00000582127 302 ntBASIC17.69■□□□□ 0.42
NEDD4P46934 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.69■□□□□ 0.42
NEDD4P46934 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
NEDD4P46934 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NEDD4P46934 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.68■□□□□ 0.42
NEDD4P46934 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.68■□□□□ 0.42
NEDD4P46934 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NEDD4P46934 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.68■□□□□ 0.42
NEDD4P46934 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD4P46934 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.68■□□□□ 0.42
NEDD4P46934 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.68■□□□□ 0.42
NEDD4P46934 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD4P46934 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.68■□□□□ 0.42
NEDD4P46934 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.67■□□□□ 0.42
NEDD4P46934 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 AC068418.2-201ENST00000577309 3703 ntBASIC17.67■□□□□ 0.42
NEDD4P46934 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.67■□□□□ 0.42
NEDD4P46934 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.67■□□□□ 0.42
NEDD4P46934 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.67■□□□□ 0.42
NEDD4P46934 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
NEDD4P46934 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
NEDD4P46934 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NEDD4P46934 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.67■□□□□ 0.42
NEDD4P46934 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
NEDD4P46934 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NEDD4P46934 AC004945.1-201ENST00000416738 983 ntBASIC17.67■□□□□ 0.42
NEDD4P46934 TLE1P1-201ENST00000422965 589 ntBASIC17.67■□□□□ 0.42
NEDD4P46934 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.67■□□□□ 0.42
NEDD4P46934 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NEDD4P46934 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
NEDD4P46934 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.67■□□□□ 0.42
NEDD4P46934 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NEDD4P46934 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 AC079316.1-201ENST00000548397 411 ntBASIC17.67■□□□□ 0.42
NEDD4P46934 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
NEDD4P46934 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms