Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC1A1P43005 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 SLC7A15P-201ENST00000424028 1363 ntBASIC15.8■□□□□ 0.12
SLC1A1P43005 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
SLC1A1P43005 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC1A1P43005 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC1A1P43005 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC1A1P43005 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC1A1P43005 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC1A1P43005 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.8■□□□□ 0.12
SLC1A1P43005 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC1A1P43005 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC1A1P43005 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC1A1P43005 SPDYE22P-201ENST00000582158 798 ntBASIC15.8■□□□□ 0.12
SLC1A1P43005 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.8■□□□□ 0.12
SLC1A1P43005 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC1A1P43005 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC1A1P43005 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC1A1P43005 AC067750.1-201ENST00000608826 6545 ntBASIC15.8■□□□□ 0.12
SLC1A1P43005 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC1A1P43005 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 AC015656.1-201ENST00000624209 3578 ntBASIC15.79■□□□□ 0.12
SLC1A1P43005 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 AC152010.1-201ENST00000415779 2006 ntBASIC15.79■□□□□ 0.12
SLC1A1P43005 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC1A1P43005 GNAQP1-201ENST00000444815 1067 ntBASIC15.79■□□□□ 0.12
SLC1A1P43005 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC1A1P43005 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC1A1P43005 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC1A1P43005 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC1A1P43005 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC1A1P43005 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC1A1P43005 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC1A1P43005 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 AC093726.1-201ENST00000608064 963 ntBASIC15.79■□□□□ 0.12
SLC1A1P43005 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC1A1P43005 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A1P43005 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A1P43005 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC1A1P43005 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC1A1P43005 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC1A1P43005 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A1P43005 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC1A1P43005 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A1P43005 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC1A1P43005 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC1A1P43005 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
SLC1A1P43005 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms