Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.85■□□□□ 0.61
COL15A1P39059 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.85■□□□□ 0.61
COL15A1P39059 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.84■□□□□ 0.61
COL15A1P39059 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 AL355334.1-201ENST00000417713 215 ntBASIC18.84■□□□□ 0.61
COL15A1P39059 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 RN7SL258P-201ENST00000478664 300 ntBASIC18.84■□□□□ 0.61
COL15A1P39059 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.84■□□□□ 0.61
COL15A1P39059 AC138894.2-201ENST00000602838 371 ntBASIC18.84■□□□□ 0.61
COL15A1P39059 AC092171.5-201ENST00000608012 942 ntBASIC18.84■□□□□ 0.61
COL15A1P39059 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.84■□□□□ 0.61
COL15A1P39059 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.84■□□□□ 0.61
COL15A1P39059 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.84■□□□□ 0.61
COL15A1P39059 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.84■□□□□ 0.61
COL15A1P39059 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
COL15A1P39059 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 AC006486.2-201ENST00000624246 2199 ntBASIC18.84■□□□□ 0.61
COL15A1P39059 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.84■□□□□ 0.61
COL15A1P39059 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
COL15A1P39059 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
COL15A1P39059 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL15A1P39059 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.84■□□□□ 0.61
COL15A1P39059 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.84■□□□□ 0.61
COL15A1P39059 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.83■□□□□ 0.61
COL15A1P39059 HYMAI-201ENST00000635591 3347 ntBASIC18.83■□□□□ 0.61
COL15A1P39059 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL15A1P39059 CYP4F23P-201ENST00000593402 1579 ntBASIC18.83■□□□□ 0.61
COL15A1P39059 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL15A1P39059 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL15A1P39059 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
COL15A1P39059 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL15A1P39059 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.83■□□□□ 0.61
COL15A1P39059 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.83■□□□□ 0.61
COL15A1P39059 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.83■□□□□ 0.61
COL15A1P39059 RN7SL8P-201ENST00000461771 266 ntBASIC18.83■□□□□ 0.61
COL15A1P39059 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.83■□□□□ 0.61
COL15A1P39059 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.83■□□□□ 0.61
COL15A1P39059 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.83■□□□□ 0.61
COL15A1P39059 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.83■□□□□ 0.61
COL15A1P39059 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
COL15A1P39059 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL15A1P39059 AC023090.2-201ENST00000625182 2110 ntBASIC18.83■□□□□ 0.61
COL15A1P39059 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
COL15A1P39059 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL15A1P39059 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL15A1P39059 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.83■□□□□ 0.61
COL15A1P39059 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
COL15A1P39059 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 ZBED1P1-201ENST00000502364 1930 ntBASIC18.83■□□□□ 0.6
COL15A1P39059 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
COL15A1P39059 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COL15A1P39059 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
COL15A1P39059 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL15A1P39059 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL15A1P39059 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.82■□□□□ 0.6
COL15A1P39059 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL15A1P39059 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COL15A1P39059 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.82■□□□□ 0.6
COL15A1P39059 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 RPL8P2-201ENST00000430538 502 ntBASIC18.82■□□□□ 0.6
COL15A1P39059 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.82■□□□□ 0.6
COL15A1P39059 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.82■□□□□ 0.6
COL15A1P39059 GCOM2-201ENST00000509133 1104 ntBASIC18.82■□□□□ 0.6
COL15A1P39059 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.82■□□□□ 0.6
COL15A1P39059 AC135983.4-201ENST00000564116 1262 ntBASIC18.82■□□□□ 0.6
COL15A1P39059 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.82■□□□□ 0.6
COL15A1P39059 AC026803.1-201ENST00000569130 274 ntBASIC18.82■□□□□ 0.6
COL15A1P39059 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.82■□□□□ 0.6
COL15A1P39059 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
COL15A1P39059 AC087045.2-201ENST00000606279 1003 ntBASIC18.82■□□□□ 0.6
COL15A1P39059 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.82■□□□□ 0.6
COL15A1P39059 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 334.5 ms