Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.33□□□□□ -0.28
THBS4P35443 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.33□□□□□ -0.28
THBS4P35443 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
THBS4P35443 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
THBS4P35443 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.32□□□□□ -0.28
THBS4P35443 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
THBS4P35443 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
THBS4P35443 ACTG1P3-201ENST00000431775 1114 ntBASIC13.32□□□□□ -0.28
THBS4P35443 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 TDH-203ENST00000531764 1110 ntBASIC13.32□□□□□ -0.28
THBS4P35443 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.32□□□□□ -0.28
THBS4P35443 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
THBS4P35443 AC015936.2-201ENST00000593177 259 ntBASIC13.32□□□□□ -0.28
THBS4P35443 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 AC008735.3-201ENST00000596646 500 ntBASIC13.32□□□□□ -0.28
THBS4P35443 AC093813.1-201ENST00000605066 256 ntBASIC13.32□□□□□ -0.28
THBS4P35443 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.32□□□□□ -0.28
THBS4P35443 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.32□□□□□ -0.28
THBS4P35443 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
THBS4P35443 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 LINC00552-201ENST00000625151 2579 ntBASIC13.32□□□□□ -0.28
THBS4P35443 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
THBS4P35443 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS4P35443 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
THBS4P35443 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
THBS4P35443 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 REXO1L4P-201ENST00000605109 1937 ntBASIC13.31□□□□□ -0.28
THBS4P35443 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
THBS4P35443 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
THBS4P35443 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 OR8S1-201ENST00000310194 1080 ntBASIC13.31□□□□□ -0.28
THBS4P35443 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.31□□□□□ -0.28
THBS4P35443 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
THBS4P35443 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.31□□□□□ -0.28
THBS4P35443 GPR53P-205ENST00000457298 1084 ntBASIC13.31□□□□□ -0.28
THBS4P35443 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms