Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.17□□□□□ -0.62
CKS2P33552 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.17□□□□□ -0.62
CKS2P33552 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.17□□□□□ -0.62
CKS2P33552 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
CKS2P33552 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.17□□□□□ -0.62
CKS2P33552 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.17□□□□□ -0.62
CKS2P33552 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CKS2P33552 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
CKS2P33552 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.17□□□□□ -0.62
CKS2P33552 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
CKS2P33552 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 AC027612.1-201ENST00000445234 2395 ntBASIC11.16□□□□□ -0.62
CKS2P33552 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
CKS2P33552 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 RPS2P28-201ENST00000314255 741 ntBASIC11.16□□□□□ -0.62
CKS2P33552 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.16□□□□□ -0.62
CKS2P33552 AC073389.1-201ENST00000595595 795 ntBASIC11.16□□□□□ -0.62
CKS2P33552 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 AC023141.13-201ENST00000604991 943 ntBASIC11.16□□□□□ -0.62
CKS2P33552 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
CKS2P33552 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 AL356585.2-201ENST00000625078 2396 ntBASIC11.16□□□□□ -0.62
CKS2P33552 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.16□□□□□ -0.62
CKS2P33552 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.16□□□□□ -0.62
CKS2P33552 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CKS2P33552 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.15□□□□□ -0.62
CKS2P33552 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 CRYGEP-201ENST00000412192 528 ntBASIC11.15□□□□□ -0.62
CKS2P33552 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.15□□□□□ -0.62
CKS2P33552 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 VN2R19P-201ENST00000442399 1052 ntBASIC11.15□□□□□ -0.62
CKS2P33552 AC108751.1-201ENST00000490852 363 ntBASIC11.15□□□□□ -0.62
CKS2P33552 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms