Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CCL1P22362 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 DFFBP1-201ENST00000433250 979 ntBASIC12.96□□□□□ -0.33
CCL1P22362 SPTLC1P1-201ENST00000447199 261 ntBASIC12.96□□□□□ -0.33
CCL1P22362 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL1P22362 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL1P22362 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
CCL1P22362 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL1P22362 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL1P22362 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL1P22362 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 TMEM261P1-201ENST00000604899 340 ntBASIC12.96□□□□□ -0.33
CCL1P22362 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 AC009118.2-201ENST00000613275 655 ntBASIC12.96□□□□□ -0.33
CCL1P22362 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
CCL1P22362 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CCL1P22362 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL1P22362 AC090505.1-201ENST00000430515 1834 ntBASIC12.96□□□□□ -0.33
CCL1P22362 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL1P22362 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL1P22362 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL1P22362 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
CCL1P22362 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL1P22362 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CCL1P22362 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CCL1P22362 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL1P22362 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 AL391825.1-201ENST00000457671 1364 ntBASIC12.95□□□□□ -0.34
CCL1P22362 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 SALL4P5-201ENST00000419001 1760 ntBASIC12.95□□□□□ -0.34
CCL1P22362 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CCL1P22362 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL1P22362 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL1P22362 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.95□□□□□ -0.34
CCL1P22362 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CCL1P22362 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL1P22362 RFPL4AP1-201ENST00000530883 850 ntBASIC12.95□□□□□ -0.34
CCL1P22362 AC131206.1-201ENST00000538078 1211 ntBASIC12.95□□□□□ -0.34
CCL1P22362 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.95□□□□□ -0.34
CCL1P22362 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.95□□□□□ -0.34
CCL1P22362 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.95□□□□□ -0.34
CCL1P22362 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL1P22362 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
CCL1P22362 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CCL1P22362 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL1P22362 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
CCL1P22362 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms