Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC079328.2-201ENST00000561241 3354 ntBASIC18.11■□□□□ 0.49
KCNA3P22001 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
KCNA3P22001 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
KCNA3P22001 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC18.11■□□□□ 0.49
KCNA3P22001 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 RN7SL494P-201ENST00000461517 304 ntBASIC18.11■□□□□ 0.49
KCNA3P22001 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.11■□□□□ 0.49
KCNA3P22001 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.11■□□□□ 0.49
KCNA3P22001 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.11■□□□□ 0.49
KCNA3P22001 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18.11■□□□□ 0.49
KCNA3P22001 AC138701.2-201ENST00000553634 226 ntBASIC18.11■□□□□ 0.49
KCNA3P22001 MIR2392-201ENST00000584881 84 ntBASIC18.11■□□□□ 0.49
KCNA3P22001 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.11■□□□□ 0.49
KCNA3P22001 PCDHB19P-201ENST00000570871 2371 ntBASIC18.11■□□□□ 0.49
KCNA3P22001 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNA3P22001 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
KCNA3P22001 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KCNA3P22001 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KCNA3P22001 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.1■□□□□ 0.49
KCNA3P22001 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KCNA3P22001 LILRP1-201ENST00000444199 1370 ntBASIC18.1■□□□□ 0.49
KCNA3P22001 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 MIR566-201ENST00000385187 94 ntBASIC18.1■□□□□ 0.49
KCNA3P22001 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.1■□□□□ 0.49
KCNA3P22001 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.1■□□□□ 0.49
KCNA3P22001 RN7SL530P-201ENST00000485097 298 ntBASIC18.1■□□□□ 0.49
KCNA3P22001 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.1■□□□□ 0.49
KCNA3P22001 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.1■□□□□ 0.49
KCNA3P22001 AC140113.1-201ENST00000603467 169 ntBASIC18.1■□□□□ 0.49
KCNA3P22001 AC006548.2-201ENST00000605217 529 ntBASIC18.1■□□□□ 0.49
KCNA3P22001 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
KCNA3P22001 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNA3P22001 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
KCNA3P22001 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
KCNA3P22001 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.09■□□□□ 0.49
KCNA3P22001 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
KCNA3P22001 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
KCNA3P22001 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.09■□□□□ 0.49
KCNA3P22001 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.09■□□□□ 0.49
KCNA3P22001 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.09■□□□□ 0.49
KCNA3P22001 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC18.09■□□□□ 0.49
KCNA3P22001 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.09■□□□□ 0.49
KCNA3P22001 AL139339.2-201ENST00000608063 657 ntBASIC18.09■□□□□ 0.49
KCNA3P22001 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.09■□□□□ 0.49
KCNA3P22001 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 AC046158.3-201ENST00000624947 2558 ntBASIC18.09■□□□□ 0.49
KCNA3P22001 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.09■□□□□ 0.49
KCNA3P22001 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNA3P22001 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.08■□□□□ 0.49
KCNA3P22001 PCDH8P1-201ENST00000428983 2773 ntBASIC18.08■□□□□ 0.49
KCNA3P22001 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KCNA3P22001 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
KCNA3P22001 AC105250.1-201ENST00000509378 2057 ntBASIC18.08■□□□□ 0.49
KCNA3P22001 AC025183.3-201ENST00000623526 1482 ntBASIC18.08■□□□□ 0.49
KCNA3P22001 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KCNA3P22001 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.08■□□□□ 0.49
KCNA3P22001 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
KCNA3P22001 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
KCNA3P22001 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.08■□□□□ 0.49
KCNA3P22001 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KCNA3P22001 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
KCNA3P22001 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
KCNA3P22001 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.08■□□□□ 0.48
KCNA3P22001 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.08■□□□□ 0.48
KCNA3P22001 AC244197.1-201ENST00000456494 951 ntBASIC18.08■□□□□ 0.48
KCNA3P22001 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms