Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 AC007326.2-201ENST00000624224 7579 ntBASIC14.06□□□□□ -0.16
TNFRSF1BP20333 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 CNN2P2-201ENST00000443536 909 ntBASIC14.06□□□□□ -0.16
TNFRSF1BP20333 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 DNAJB3-202ENST00000449667 1266 ntBASIC14.06□□□□□ -0.16
TNFRSF1BP20333 CNN2P3-201ENST00000450201 906 ntBASIC14.06□□□□□ -0.16
TNFRSF1BP20333 KLF2P3-201ENST00000451977 1087 ntBASIC14.06□□□□□ -0.16
TNFRSF1BP20333 AL589987.1-201ENST00000453380 819 ntBASIC14.06□□□□□ -0.16
TNFRSF1BP20333 AC004967.1-201ENST00000453589 447 ntBASIC14.06□□□□□ -0.16
TNFRSF1BP20333 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 AL136317.3-201ENST00000618497 906 ntBASIC14.06□□□□□ -0.16
TNFRSF1BP20333 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 CLK3P2-201ENST00000427566 1453 ntBASIC14.06□□□□□ -0.16
TNFRSF1BP20333 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFRSF1BP20333 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 AL354702.1-201ENST00000442006 1960 ntBASIC14.05□□□□□ -0.16
TNFRSF1BP20333 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms