Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1DP16402 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1DP16402 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1DP16402 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1DP16402 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1DP16402 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1DP16402 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1DP16402 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HIST1H1DP16402 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
HIST1H1DP16402 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1DP16402 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 YBX1P5-201ENST00000509441 847 ntBASIC12.84□□□□□ -0.35
HIST1H1DP16402 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 AP001059.3-201ENST00000619053 235 ntBASIC12.84□□□□□ -0.35
HIST1H1DP16402 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1DP16402 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1DP16402 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1DP16402 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1DP16402 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
HIST1H1DP16402 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.83□□□□□ -0.35
HIST1H1DP16402 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1DP16402 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
HIST1H1DP16402 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 KRT8P22-201ENST00000562317 1415 ntBASIC12.83□□□□□ -0.36
HIST1H1DP16402 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 RN7SL618P-201ENST00000477850 296 ntBASIC12.83□□□□□ -0.36
HIST1H1DP16402 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 POLD2P1-201ENST00000511220 997 ntBASIC12.83□□□□□ -0.36
HIST1H1DP16402 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 AL512361.1-201ENST00000554200 418 ntBASIC12.83□□□□□ -0.36
HIST1H1DP16402 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 MIR4469-201ENST00000583919 79 ntBASIC12.83□□□□□ -0.36
HIST1H1DP16402 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1DP16402 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1DP16402 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms