Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 AC015656.1-201ENST00000624209 3578 ntBASIC13.56□□□□□ -0.24
HLA-DOBP13765 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 KRT8P14-201ENST00000414254 1442 ntBASIC13.56□□□□□ -0.24
HLA-DOBP13765 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 AL033527.5-201ENST00000641382 801 ntBASIC13.55□□□□□ -0.24
HLA-DOBP13765 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 MSTO2P-201ENST00000314835 1709 ntBASIC13.55□□□□□ -0.24
HLA-DOBP13765 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DOBP13765 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DOBP13765 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 AL162726.2-201ENST00000438986 1017 ntBASIC13.54□□□□□ -0.24
HLA-DOBP13765 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms