Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.06□□□□□ -0.16
UBL4AP11441 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 MIR661-201ENST00000384842 89 ntBASIC14.06□□□□□ -0.16
UBL4AP11441 AC236430.1-201ENST00000402231 743 ntBASIC14.06□□□□□ -0.16
UBL4AP11441 AC134915.1-201ENST00000426461 574 ntBASIC14.06□□□□□ -0.16
UBL4AP11441 AC093813.1-201ENST00000605066 256 ntBASIC14.06□□□□□ -0.16
UBL4AP11441 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.06□□□□□ -0.16
UBL4AP11441 AC027612.1-201ENST00000445234 2395 ntBASIC14.06□□□□□ -0.16
UBL4AP11441 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.06□□□□□ -0.16
UBL4AP11441 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 AL138799.1-201ENST00000448213 1675 ntBASIC14.06□□□□□ -0.16
UBL4AP11441 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
UBL4AP11441 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.06□□□□□ -0.16
UBL4AP11441 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.06□□□□□ -0.16
UBL4AP11441 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBL4AP11441 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.06□□□□□ -0.16
UBL4AP11441 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.05□□□□□ -0.16
UBL4AP11441 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
UBL4AP11441 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.05□□□□□ -0.16
UBL4AP11441 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
UBL4AP11441 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 AL442647.2-201ENST00000429864 857 ntBASIC14.05□□□□□ -0.16
UBL4AP11441 AL353779.1-201ENST00000434793 351 ntBASIC14.05□□□□□ -0.16
UBL4AP11441 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.05□□□□□ -0.16
UBL4AP11441 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.05□□□□□ -0.16
UBL4AP11441 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.05□□□□□ -0.16
UBL4AP11441 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 AC120045.2-201ENST00000567334 178 ntBASIC14.05□□□□□ -0.16
UBL4AP11441 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.05□□□□□ -0.16
UBL4AP11441 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.05□□□□□ -0.16
UBL4AP11441 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.05□□□□□ -0.16
UBL4AP11441 MIR8072-201ENST00000614241 80 ntBASIC14.05□□□□□ -0.16
UBL4AP11441 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.05□□□□□ -0.16
UBL4AP11441 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.05□□□□□ -0.16
UBL4AP11441 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.05□□□□□ -0.16
UBL4AP11441 AC007431.3-201ENST00000623221 587 ntBASIC14.05□□□□□ -0.16
UBL4AP11441 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.05□□□□□ -0.16
UBL4AP11441 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBL4AP11441 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.05□□□□□ -0.16
UBL4AP11441 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
UBL4AP11441 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.05□□□□□ -0.16
UBL4AP11441 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UBL4AP11441 AC007787.1-201ENST00000588095 1583 ntBASIC14.05□□□□□ -0.16
UBL4AP11441 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBL4AP11441 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.04□□□□□ -0.16
UBL4AP11441 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UBL4AP11441 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms