Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.41■□□□□ 0.22
CCDC172P0C7W6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 KRT18P28-201ENST00000453838 1332 ntBASIC16.41■□□□□ 0.22
CCDC172P0C7W6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 AC018442.1-201ENST00000421439 2061 ntBASIC16.41■□□□□ 0.22
CCDC172P0C7W6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC172P0C7W6 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 RPL13AP25-201ENST00000484130 612 ntBASIC16.4■□□□□ 0.22
CCDC172P0C7W6 GAPDHP40-201ENST00000505218 1006 ntBASIC16.4■□□□□ 0.22
CCDC172P0C7W6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 AC135586.1-201ENST00000539323 574 ntBASIC16.4■□□□□ 0.22
CCDC172P0C7W6 SRD5A3P1-201ENST00000603021 949 ntBASIC16.4■□□□□ 0.22
CCDC172P0C7W6 AC023511.2-201ENST00000618803 211 ntBASIC16.4■□□□□ 0.22
CCDC172P0C7W6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC172P0C7W6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC172P0C7W6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC172P0C7W6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.39■□□□□ 0.22
CCDC172P0C7W6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 COL6A4P2-202ENST00000504443 2753 ntBASIC16.39■□□□□ 0.21
CCDC172P0C7W6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 NUS1P3-201ENST00000423502 862 ntBASIC16.39■□□□□ 0.21
CCDC172P0C7W6 AL512638.1-201ENST00000457493 794 ntBASIC16.39■□□□□ 0.21
CCDC172P0C7W6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 RARRES2P5-201ENST00000564013 466 ntBASIC16.39■□□□□ 0.21
CCDC172P0C7W6 AC009407.1-201ENST00000568958 598 ntBASIC16.39■□□□□ 0.21
CCDC172P0C7W6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC172P0C7W6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms