Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPM2P07951 RPL5P21-201ENST00000404620 815 ntBASIC17.28■□□□□ 0.36
TPM2P07951 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.28■□□□□ 0.36
TPM2P07951 MKNK2P1-201ENST00000437526 628 ntBASIC17.28■□□□□ 0.36
TPM2P07951 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPM2P07951 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.28■□□□□ 0.36
TPM2P07951 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM2P07951 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM2P07951 HNRNPUP1-201ENST00000554987 333 ntBASIC17.28■□□□□ 0.36
TPM2P07951 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM2P07951 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM2P07951 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TPM2P07951 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM2P07951 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM2P07951 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
TPM2P07951 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
TPM2P07951 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM2P07951 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
TPM2P07951 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM2P07951 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TPM2P07951 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TPM2P07951 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TPM2P07951 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.27■□□□□ 0.36
TPM2P07951 MTDHP5-201ENST00000598980 586 ntBASIC17.27■□□□□ 0.36
TPM2P07951 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM2P07951 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM2P07951 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM2P07951 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM2P07951 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TPM2P07951 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM2P07951 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TPM2P07951 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
TPM2P07951 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TPM2P07951 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM2P07951 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TPM2P07951 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM2P07951 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.27■□□□□ 0.35
TPM2P07951 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM2P07951 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TPM2P07951 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC17.27■□□□□ 0.35
TPM2P07951 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.27■□□□□ 0.35
TPM2P07951 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM2P07951 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TPM2P07951 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM2P07951 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.26■□□□□ 0.35
TPM2P07951 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM2P07951 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TPM2P07951 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TPM2P07951 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM2P07951 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.26■□□□□ 0.35
TPM2P07951 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM2P07951 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.26■□□□□ 0.35
TPM2P07951 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
TPM2P07951 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM2P07951 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM2P07951 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM2P07951 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.26■□□□□ 0.35
TPM2P07951 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TPM2P07951 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM2P07951 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TPM2P07951 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 TET3-201ENST00000305799 5174 ntTSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TPM2P07951 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms